rs227671030 SNP Detail

Summary

• ID
  rs227671030
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:81821899 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGACCCTGT CTATTGCTTC TTATATCTGA
  GAGTTTTGCT TTACAGGCTA AAGCTATCTG CTCTCCAGTG CTTTGTCCAC CTGTGACCCT
  GTCTGTTGCT TCTTATATCT GAGAGTTTTG CTTTGCATGC TTCAAAACTG TTGTGTTCTG
  Y
  CATTTTTTGA TTGTCATGTC ATCAGTGTTT ACCCCTTTTA TCTAAATAAA AGAACTATTT
  CATCCTATTA GCAGTTCTTT TGATTTTCAA TATTTATATC CCAACTTTTT ATATATGCTC
  CATATATCTT AATTGATGCA TTATTTTTGT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322288137	CHEV_7_89317037	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227671030					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:81821899 () rs orientation: forward

Symbol	Name	Function Class
Gm45089	predicted gene 45089	514 bp downstream
Gm73333	predicted gene, 73333	within coordinates
Tssr67529	transcription start site region 67529	1647 bp upstream