rs227382316 SNP Detail

Summary

• ID
  rs227382316
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108714556 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttccttatg tggtggtgac ccccaaccgt
  agagttgttg ctacttcata actgtaattt tgctactgtt atgaatcgta atgcaaatac
  ctgtgttttc caacagtcta atgcaacccc tgtgaaaggg ttgtttgaca caaaagaggt
  S
  atgacccaca gactgagaaa cactgTTTAG ACTCTGAcgc agtctggcaa actttctgga
  tgacagaagt ggtccacgtc tgcaaggtct actacacgac agccactagt cgtgtgtggc
  tgataacagc tgccgtgtgg ctgctgtggc                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321893940	CHEV_6_108687589	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227382316					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108714556 () rs orientation: forward

Symbol	Name	Function Class
Rr636189	regulatory region 636189	1007 bp distal
Rr636190	regulatory region 636190	1246 bp distal
Rr636191	regulatory region 636191	724 bp proximal