rs227321467 SNP Detail

Summary

• ID
  rs227321467
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17061509 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAAGCAGTG AAATGAGGGT CTCTGTGTCC
  CCAGAGAGGA GCAGCGCTTT GATTTCTGGG ATTATGTAGT GCCTGCGTCT ACTCCCAGAT
  ACATTCTAGC TGTCGAGTTT TGCAGGACAC TTGTCTACTG ATCATATATT GCCATCTTGT
  Y
  ATTAATTTAT CGAACTAGCC CACCTGGGTT TCTGTTACTT GCAATCAAAA GGGGTTTAAT
  TACAAcacca gcttcagcta gacgaaaccc caggatggag ggtagtaggt gggtatacat
  ctcaccacta gctgaggagc tgctggcatc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321753422	CHEV_6_17011510	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227321467					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17061509 () rs orientation: forward

Symbol	Name	Function Class
Gm15473	predicted gene 15473	within coordinates
Rr626752	regulatory region 626752	928 bp distal
Rr626753	regulatory region 626753	607 bp proximal
Rr626754	regulatory region 626754	967 bp proximal