rs227295750 SNP Detail

Summary

• ID
  rs227295750
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:102418918 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGTATGTAA AGAGCTGGGC
  ATGATGGTCA GGGGGAGTTG GAGACAAGTG GATCACGGAG ATTGTGGATG GCCAAGCTTA
  ATCAACTTGG TGAGTGTCAG GCCAAGCATA GACACAAACA AACAAACAAA CAAACAAACA
  GCCAGGACAG ACAGACAAGC AAACAAAGAT AGAAAATATC TGAGAAATGA CATTCAAGCT
  S
  CTCTGATATC CATACACATG AGATTCATAA GCATGTATGT ACACACACAC ACACACACAC
  ACACACATCT AATTCCTAAA TATAACCTCT TCAGTCTGGA TAATGTTATA TATACATAAT
  GATATGTATA TTTTCAGGGA TGACCATTTG GCCTTGAACA ACTAATTGGT GTGCTCTTCC
  CTGGGGACGA GCACCTCCTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320439070	CHEV_2_102428730	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227295750					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102418918 () rs orientation: forward

Symbol	Name	Function Class
Pamr1	peptidase domain containing associated with muscle regeneration 1	Intron
Rr373606	regulatory region 373606	143 bp downstream
Rr561706	regulatory region 561706	1386 bp proximal
Rr561707	regulatory region 561707	1618 bp proximal