rs227134441 SNP Detail

Summary

• ID
  rs227134441
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148657278 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTGCTGCG TGAGCGTGTG
  GCAGTGGCTG TGCTCACTGT CCTCAGTTTC TTCTTTCCCC CTTTGTTCCT TCTTTGGTTT
  GTGTTTGTGT ATATGTGCGC GTGTTTGTTT GAACCAGAAT GGCCTTGAGC TTGCGATCCT
  CCTGCTTCCG CCTCTGCAGT GCTGGAATTG CAGGCCTGTG CAATCACACC GGGCGGGGGG
  S
  GGGGGGGGGG GGCGGTCAGA CCCAGGCCCA CCAGCATGCT TGCAGACACT CTGCCAGCAG
  AGCTACATTC CCGGTCCTAC TCTTCTTTCC TTCTCAGTCT GAAAATGCAG CTGGAGTGAG
  GAAGAGCGGA CCACTGCCTA GCGCCGAGGT ACAGTGTCAC GGCTGCTGTG TCACCTATGG
  GAGGGGTGGA GATCACAGCC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321421272	CHEV_4_147946930	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227134441					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148657278 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Exosc10	exosome component 10			Intron
				Noncoding-Transcript-Variant
Rr604704	regulatory region 604704			1628 bp distal