rs226845686 SNP Detail

Summary

• ID
  rs226845686
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124067463 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAATAAGGT GGAATATCTG TGATTTTTTT
  ATTATTACta ttatttagtt tattatataa ttagccacta ctctttcctt tcatccctct
  aaactttcca tataaccttc cttgctccct ctcaattgca tggtgtcttt tAAAGTTAAC
  W
  tatatatata tatatatata tatatatata tatatatata tatatatata tCCATTCATG
  TGTGTGTGAT ATGCATACTA CAGTGTGGAT GTGCACAGCA GAGTATGGAT TCAGGGTGTC
  ACTTTTCACT TTCCACCCTG TTAGAGGCAA                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320926846	CHEV_3_123976732	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226845686					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124067463 () rs orientation: forward

Symbol	Name	Function Class
Gm43731	predicted gene 43731	within coordinates
Rr584584	regulatory region 584584	454 bp distal
Rr584585	regulatory region 584585	1081 bp proximal