rs226637948 SNP Detail

Summary

• ID
  rs226637948
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:98890090 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATGTTTTT AATTTCTCTA
  TCTTCTTAAG TGAAACAAAG AATCCCTTTG TCTGAATACA ATCAAGCTGA ATACAATACT
  ATTTATAAAA GCAAAAATAG CCAGCAATTA TATTCATTAT ATGCATCTTT TCTGTGCATG
  TGTGTATACA TGTATATTCT ATGAACATGT TTGGCTTCTT ATGATTGGTT TTGAAATCAA
  R
  CTCAGGTCTT CATGGTTGTA TGATAATCAT TCTACAGAAT AAGCCATCTC CCCAGCTCTA
  TCTATGTCTT TGAATTGTAG AATATTTTAC AATGTCTTAT TGAAGATGAT ACAAATCTGC
  AGCTAATTAA CGTGTATGCG TTTTTTAGGT CAGGGCAGGA AAAGGGTTAC ATGTCAAACG
  TGTGAAATCT TATGACTGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321222469	CHEV_4_98668544	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226637948					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98890090 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dock7	dedicator of cytokinesis 7			Intron
				Noncoding-Transcript-Variant
Rr595814	regulatory region 595814			1193 bp distal
Tssr42518	transcription start site region 42518			1872 bp upstream