rs226510104 SNP Detail

Summary

• ID
  rs226510104
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52936922 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATCCATTAC TCTTCCTCCA
  GGAAAGATTT CTCTTCTAAG TAAGGAAGAA AAAATAGCAT TCACGTTCTC AAACCTGGTC
  GACATGAACT GGTGTATGTG AGCTTCTAGA TCAGCTTCAA AGTTAGTACT GTTTCAGCAC
  GCTTCCTCCT GCTTAGAGCT CAGACCTCTC TCTACTCGAG GTAGTAAACG GGGAGAAGAG
  R
  AGGATAAGGG CATAAAATAG ATGCGATACT GAAATGACAA ACTATTATGT GAAGCGTCAC
  AGCTTCTGGT CTGAATGGCT TCTCTAAATA TGTAGAGGTT CATTGAGCTT ATGGTCTGAT
  TCCTGGATTT GATTAATTTC AGTGTGTGAC TTTTTTTTTT CAAGAATTGA AGATTATTGA
  TATTTTTGCA AACTATTTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320766569	CHEV_3_52833423	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226510104					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52936922 () rs orientation: forward

Symbol	Name	Function Class
Rr576621	regulatory region 576621	684 bp distal
Rr576622	regulatory region 576622	within coordinates
Rr576623	regulatory region 576623	263 bp distal