rs226404391 SNP Detail

Summary

• ID
  rs226404391
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:137818202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tataaaaat agagaaagca aactgagtac
  tgtcaatatt tacatttaat actttcttat gatatgacca gttactccaa gctcccagta
  ccttgactct tgctgttata gtctataaac tggagctgta agttataata aacactcatt
  Y
  ctgtaaatgg ctttgataga gaacttaatc aGATGTTCTC AAATATTACT GAGAGGTCAT
  AGTAACTACA TATGTTCATA AAAACTAAGG AAATTAGAAA CCTGCAAGGC AATGTTAAAG
  AAAGCAAGTT ACAACTGTGT ATGAGTTAAC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320522682	CHEV_2_137802018	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226404391					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:137818202 () rs orientation: forward

Symbol	Name	Function Class
Rr565959	regulatory region 565959	1587 bp proximal
Rr565960	regulatory region 565960	1721 bp proximal