rs226267320 SNP Detail

Summary

• ID
  rs226267320
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:87344693 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACCTCCCCT ACCATGTGAA TCCACTCTCT TTCTGACTCT
  CATTAGATAA CAACGGGCTT CTAAGAGATA AGAACAAAAA ATATAATAAG TAAGATAATA
  T
  AAAAACTATC ACATCCAAGT TGAACAAAAC AAACCAACAG AAAAAAAGGA GTCTAAGAGC
  AGGCACAAGA ATCAGCCCCA CTCGTTCTCA TGCTTAGGG                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320833450	CHEV_3_87241308	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226267320					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87344693 () rs orientation: forward

Symbol	Name	Function Class
Fcrl5	Fc receptor-like 5	Intron
Rr397756	regulatory region 397756	1485 bp downstream
Rr579488	regulatory region 579488	1491 bp distal
Tssr29807	transcription start site region 29807	1599 bp downstream
Tssr29808	transcription start site region 29808	1567 bp downstream
Tssr29809	transcription start site region 29809	1557 bp downstream