rs226140877 SNP Detail

Summary

• ID
  rs226140877
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152448018 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGATGAGGAT GGTAAGAGCG
  AGAAACGGAA GAACAAGGAC CCTCTCTACG CCAAGATGGA GGAACGCTTC TACCGCTACG
  GCATCAAGCC CGAGTGGATG ATGGTTCACC GCATCCTGAA CCACAGGTGA GGGTGTTGGG
  TAGCACCTGC CGGGTGAGGG CTGTCCAGGC TTGCCTTTCA GAGCCAGGAG TAGGCTCAGT
  A
  GGGCAGGAGC CGAGTAAGGA CATCTCACTG CAGGGGATGT GGCTGTCCAA CCAGGAGTGT
  CACGCCTCTG CACAGGGGAA CTGTCATGCT CAACATTCTC ACTCTCAGTA GGACAGTGCC
  ACAGACACAC ACAGCAGGGC AGTGCCACAG ACACACACAG CAGGACAGTG CCACAGACAC
  ACACAGCAGG ACAGTGCCAC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321434325	CHEV_4_151737670	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226140877					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152448018 () rs orientation: forward

Symbol	Name	Function Class
Chd5	chromodomain helicase DNA binding protein 5	Intron
Rr605861	regulatory region 605861	1719 bp proximal