rs226104031 SNP Detail

Summary

• ID
  rs226104031
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:93968148 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTCAGGAGG GGCGTGTCAG GCACTGAAGA
  GATCTACACC ATGGGCAAGC ACCAGCCTTT CCATCCCCAC GGGCACCCTT CCCATTTACT
  AACGGGGAGT TCCTGGTAGG ACAATGAATT GAGGAGTAGG GCCTGCCACA GGCACAGGTG
  Y
  ATCAGTGTCC CCTTTCCTGG TGTACCACAA CACAGGGTAG GCATGTAGCA GATATTAGCT
  GTGGCCTCTT AGCTGGCTGA TGACCAGACC TCCTGGAGGT GGCAGCTCTC ACTAGTTGTT
  TAGGAAAGCC AGCAGCCTGA GGCTAGGTGT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319844436	CHEV_1_95937000	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226104031					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:93968148 () rs orientation: forward

Symbol	Name	Function Class
Pdcd1	programmed cell death 1	Intron