rs225926222 SNP Detail

Summary

• ID
  rs225926222
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:21326474 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTTTCAGAA CAGACTGTTT CAAAACAATA
  ACAAAAACAA AAGACTATCT TATTGTTAAA ATAGAACCAA AACCCTTGTT AAAATCTGAG
  ATTTTGCTGC ATTTTAAACT CTTAACACCT CCTAAAAATA GCTGAGTCAG TGACAGGTGT
  Y
  AGGATGACCC AGGATCTGTG AGGCATTCCC TAAGTGCTCC AGCACATGAC GGATTCTCAC
  ATGGCCAGCC TCTGTCCTTG ACATGGTTGT CTTAGATACA GGCATCACCC AGGAGTTTCC
  ATTCCATTCA GCCAAATGTC TCAATCCTCT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320682576	CHEV_3_21171232	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225926222					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:21326474 () rs orientation: forward

Symbol	Name	Function Class
Rr374645	regulatory region 374645	within coordinates
Rr574111	regulatory region 574111	within coordinates