rs225773013 SNP Detail

Summary

• ID
  rs225773013
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37258894 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCTCCTCTG CTAAGAGAAA TCTACAAACA
  CAGGGGATTG TGTTATTCGC GTCACTGAGA GCAAGAGGAG AACGTCTGAT TTGGGCATAG
  TATTCCAAGC ACAGTTTATC GAAGTAACTG GACTCATAAA TACAAAGTTG GAAAGCATCT
  M
  ATGTGTACTG GGTTCTCCCT GGGAGCAAGT GCCTGTCACT GTCAGGGGAG ACCTCTCCTG
  GAGGGCACAA ATACTGCAAC GTGTCAGTGA TCCAGTTTCA GGAGTGAAAA ATAATGTTTT
  GTGCAAATGC ATTAATATTC TTCAAAATCT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320708261	CHEV_3_37103667	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225773013					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37258894 () rs orientation: forward

Symbol	Name	Function Class
Gm64461	predicted gene, 64461	within coordinates
Gm64469	predicted gene, 64469	within coordinates
Rr367425	regulatory region 367425	278 bp downstream
Rr367426	regulatory region 367426	589 bp upstream
Rr397645	regulatory region 397645	467 bp downstream
Rr575433	regulatory region 575433	within coordinates
Rr575434	regulatory region 575434	621 bp distal
Rr575435	regulatory region 575435	33 bp proximal
Rr575436	regulatory region 575436	505 bp proximal