rs225718262 SNP Detail

Summary

• ID
  rs225718262
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135836781 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCAGGATGA CAGGTGCATA CTGTGGCCAG
  GTGAGACAGC CTAAGGGGAA GCAGGGGCCT GAAACCGCCT GCTGGCTTTT CAGATGGCTG
  CCTCCAGCAT TTCCTCTTTG CCTACCTGGA GCTTGGCTTA CTGGGGTGAG GGCAAGCTCC
  Y
  AGTTAACTAC TTGAACTGAC AGGGGTTCAT CTAAGTCACC TCAGGACCAT TATCATCTGG
  CTGCTGGCTA AGGAGCCAGC TCACCAGGGT CTGGTCACAG CTCAGGGAGG ATgagccagg
  aggacgattg agccatgtgt ccaaatcctt                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321354039	CHEV_4_135665385	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225718262					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135836781 () rs orientation: forward

Symbol	Name	Function Class
Rr602271	regulatory region 602271	1936 bp distal
Rr602273	regulatory region 602273	449 bp proximal