rs225643369 SNP Detail

Summary

• ID
  rs225643369
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:113359626 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTTA AAGATCTGCC TAATAATAAT
  C
  GCCCAGACAA ATGTCACTGC ATTTG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321910711	CHEV_6_113332659	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225643369					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113359626 () rs orientation: forward

Symbol	Name	Function Class
Arpc4	actin related protein 2/3 complex, subunit 4	Intron
Rr636502	regulatory region 636502	910 bp distal
Rr636503	regulatory region 636503	1708 bp proximal
Tssr58200	transcription start site region 58200	1918 bp downstream