rs225310901 SNP Detail

Summary

• ID
  rs225310901
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:58279417 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTGCCTTG GCATTGCTCT
  TCTGACTCCA AATGACAAAG GCTAGGCAAA GTCCAAACCT TTCTTTCCCT ATATATGGAA
  TATGTCCAGA ATTCCCGCCT GTTATTTTTT CCCTGATAGA CTGTAGTAAC TAACATTCTC
  CTTTTTGAGC TTCCACTGTC TGTGGGCCAT ATTTATATTC TTTCATCATG TGTACTTTTT
  Y
  ACATGTCAAC TGTAGCAAAA TATCCTTTCA CCCATGTCTT CTTCAGGAAA ATATTCTTTT
  ATGTGTCTGT TTTAGCAAAA CATCCTTTCA CCTTTGTGCC ACAGCAAAAC ATCATTTGAC
  GTAACTGACT TCACAAACAA ACCAGAAGTT CCCATTTTAC ATAGCTTTTG ACCAAATCAT
  TTATTCATAA TAATTCAGTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321137474	CHEV_4_58292289	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225310901					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:58279417 () rs orientation: forward

Symbol	Name	Function Class
Rr592884	regulatory region 592884	678 bp distal