rs225195142 SNP Detail

Summary

• ID
  rs225195142
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:103046292 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAATGAGGT CCCGGGTTTT
  GATTAGCTTT AGCAATACCA AGTTAACTGG GCTTTTCTGT CTGAGACAAA TGATTCGCCC
  TTAGTAAAAT GCATCAAGAG GAAAACACGC CTGGGGATGT CAGGCACAGC TTTTAGGAGC
  CTCAGACATA AATCCACAGG CATGTGAGGG CAACTCAGAC ACAAGAAACC CACCTTGATT
  A
  GTTCCTGGCA AGCCCCACCT CCCAAAGAAA CTTAGGGCTT GGAGTGAAGA GATGTGTTTA
  TCACTCTGTC ACAGAAACAG CCTCCTCCCC CTTTCTTCCT CTACAGTAAC TAATGTGTCT
  AACTTTCCCC ACATTCCCCA GAGCTAAGTC ACCTTCAAGT AGAGCTATGC CCTTGCTAAG
  TTCTTACAAA CTGATTTAGA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321236094	CHEV_4_102861700	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225195142					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:103046292 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr596372	regulatory region 596372			within coordinates
Slc35d1	solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1			Intron
				Noncoding-Transcript-Variant