rs225184993 SNP Detail

Summary

• ID
  rs225184993
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:72505023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCTCACCG CCCCCGCCCC
  CATTCTCCTC CCCCAGTTGT TGCGGCTGCA GGGATAGAAG CACACCATGG CTGGAGACAG
  TTTCTGCCAG TTAACCCTGT GTTTCTCTGG CTCTCTCTCT TCTAGGCTCC CCTTATCATG
  CTTCCTCGCC CTGTACCTCC CCGGAGTCTT CTTTTTTTTT CCCCTTTTTA TAGAAAGATC
  R
  TGTGCACGAG ATAATTCTGA TTGCTGGTAA TTTCTTTAAA ATCTAGTCAT AAGCACAATT
  CCACAGTTCA CGGCAGCCTT CTCTTCCCAT ACCTCTCCTC CTCCTTTTCA TTCTTTGTTG
  ATGGCTACAT AGTATCACTA CCTGGACTGA CCCTGCCTTC ATTTAACCAT TTTTGGACTT
  AGCCGTAAGC AATGGTACAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320343421	CHEV_2_72512736	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225184993					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:72505023 () rs orientation: forward

Symbol	Name	Function Class
Gm54161	predicted gene, 54161	267 bp upstream
Rr559011	regulatory region 559011	730 bp distal
Rr559012	regulatory region 559012	29 bp distal