rs225130334 SNP Detail

Summary

• ID
  rs225130334
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:53337780 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCCCCTCTC TACTTCCCTA TGTCTTCCCA TAAAACAAAG
  GACCTTTGTG TGAGAAAAGG ACCACCTGAC ACTAGGTCAC AATCTCTGGG TCACATTAGT
  K
  TCCCTTCTTA AAGTGACATT CTCACATCCC CTGCTGTCCC CACTTCCACG GCTCACAGAG
  AGCCTCTATT CTTTCTTGGT GTTGAGGAAG AAATGGTGT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321117457	CHEV_4_53350652	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225130334					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:53337780 () rs orientation: forward

Symbol	Name	Function Class
Rr376485	regulatory region 376485	658 bp upstream
Rr592236	regulatory region 592236	14 bp proximal
Rr592237	regulatory region 592237	1435 bp proximal
Rr592238	regulatory region 592238	1929 bp proximal