rs225062191 SNP Detail

Summary

• ID
  rs225062191
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:75513383 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gcttggatt acaagtgtgt gtcacaatga
  cctagctTCA GAGACTGGAT GAGACTGTAT GAAACAGTCA AAGCATTACC CTGGGAAGAA
  ATACTGTACA CAAGTCTGTT AACCCAAAGC ACTGCCTGGG AGGCCCACAG CACAAGTGCT
  G
  TTTTCTGCAA TGAACAAAGC ACTCAGCATT TCCTGTAAGG AACCCCGTGA CTGGCGCATG
  ACTTACACCA CAAAGACCTA TCCCCGAACC ACTGCTTTGT GAAACCTGAA CAGCATCTCA
  GAGGAAATGC TAGGGTGGAG CCCCTAACAA                                 
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320351244	CHEV_2_75521096	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225062191					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:75513383 () rs orientation: forward

Symbol	Name	Function Class
Igs15	intergenic site 15	within coordinates
Nfe2l2	nuclear factor, erythroid derived 2, like 2	Intron
Rr367218	regulatory region 367218	within coordinates
Rr559542	regulatory region 559542	1180 bp distal
Rr559543	regulatory region 559543	834 bp distal
Rr559544	regulatory region 559544	546 bp distal
Rr559545	regulatory region 559545	342 bp distal
Rr559546	regulatory region 559546	within coordinates
Rr559547	regulatory region 559547	1621 bp proximal
Tssr18460	transcription start site region 18460	160 bp upstream