rs225015358 SNP Detail

Summary

• ID
  rs225015358
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:13600876 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGACTTTT AGCAAAGTAT
  AATCCTAACT GCCCCCCCAA TCACTGACTC CCAGGCTTCA GAACGTAAAC AGATTTCACG
  TGACTCAAAT GCTCAGAGAC CAAGAACAAG GTTCAGCACA CTTTTTCTAC AGTTACTGTT
  TTAAGCTTTG CAGGCAGGTC ATGGAGTTTT TATTGAAACT ACTAAACTAT GCCATCTATC
  R
  TGATAAAAAT CAAGTAACAA GGAGTTTTAA AACCTACATC AGATGGCTCA CAAACACAGC
  TCTAACGCCT GTCTGGCCTC TGCAGCATGC ACATCTACAC CTATACCTAC CTACGTACAC
  ACACACAACA AACACACACA CTAATAATGC CTTAAATGAG GAAGTACACA TTTTAATATC
  TCTCAACATT GATAGATTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321748393	CHEV_6_13550877	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225015358					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13600876 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr626572	regulatory region 626572			646 bp proximal
Tmem168	transmembrane protein 168			Intron
				Noncoding-Transcript-Variant