rs225007041 SNP Detail

Summary

• ID
  rs225007041
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119466177 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAGGTGGAG GCACATTACT AACTAGTACT
  TAGTAGAGTA CTTAGTGCTT GCTTTAGCGT ACACAAAGCC CTTGGGCATT ATAGGTATGG
  AGAGACGACT TACTCCTGCA GAAGACAGGT GACTTGACAA ATACGGAGGG GCTCTGAGAG
  Y
  CTACTCTCAG CCTAGGCtgt cttagttcag attgctattg ctgtgatgaa acaccgtgac
  caaagcacct tggggaggac aagggttatg tgacttccac ttccacatct cagttcatct
  taaaaggaag tcaagacagc aacccaaaca                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321928161	CHEV_6_119439234	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225007041					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119466177 () rs orientation: forward

Symbol	Name	Function Class
Rr637697	regulatory region 637697	1803 bp distal
Rr637698	regulatory region 637698	592 bp proximal
Rr637699	regulatory region 637699	692 bp proximal
Rr637700	regulatory region 637700	1291 bp proximal
Rr637701	regulatory region 637701	1726 bp proximal
Wnt5b	wingless-type MMTV integration site family, member 5B	Intron