rs224990476 SNP Detail

Summary

• ID
  rs224990476
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:118826689 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTAAG CCCAGAGAAC AAGATGGGGT
  G
  ACTTACAAAC TGTCTCTTGG GGAGA                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321926237	CHEV_6_118799746	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224990476					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:118826689 () rs orientation: forward

Symbol	Name	Function Class
1700080F18Rik	RIKEN cDNA 1700080F18 gene	within coordinates
Cacna1c	calcium channel, voltage-dependent, L type, alpha 1C subunit	Intron
Rr637540	regulatory region 637540	1700 bp distal
Rr637541	regulatory region 637541	799 bp distal
Rr637542	regulatory region 637542	1457 bp proximal