rs224983405 SNP Detail

Summary

• ID
  rs224983405
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:101865388 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttttttttt tggttttttg aaacagggtt
  tctctgtata gccctggctg gctgtcctga aactcacttt gtagaccaag ctggtcttga
  actcagaaat cggcctgtct ctgcctccca agtgctggga ttaaaggcac gagccaccac
  M
  gcctggcCCT GGCCTTATTC TTGAATTCAA GATTGTTGTT AAGCTtttta ttctcataat
  aactgaggct agttcacttt tctcttacat atggggaaac gaaggcacag agagagatat
  gaaaggaact ctcccaggat tagacagcAT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320433803	CHEV_2_101875200	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224983405					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:101865388 () rs orientation: forward

Symbol	Name	Function Class
Ldlrad3	low density lipoprotein receptor class A domain containing 3	Intron
Rr561613	regulatory region 561613	1012 bp distal
Rr561614	regulatory region 561614	248 bp distal
Rr561615	regulatory region 561615	1378 bp proximal
Rr561616	regulatory region 561616	1991 bp proximal