rs224901299 SNP Detail

Summary

• ID
  rs224901299
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:134602760 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    acacagaGG CAATAGGCAG ACACACACAG
  TTCAGCTTGT TTTGTTGAAG CTGCTAGCCC TGTGTGTTGG GGGTGGTTTT GTTGTCACTC
  TCTGTGTTGA TACAAATAAC TATTACCATA TGATCTGAAG TCCCCTTACC AGAGGCTAGC
  M
  CCTCTGCCTG CCCTGCTCCT GAGTGCCTGG GAGACTTAGT TCTTGTAAGG GGCTTTAGCT
  CTTATCTGAA GATCCTGGAC TTTGTTTGAA GCATCCCTCC CTCCCCCCAG AGTTGCAAAT
  GAAAGGCTTT CAGTGCGAGT CTCTCAGAGA                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319983877	CHEV_1_136571599	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224901299					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:134602760 () rs orientation: forward

Symbol	Name	Function Class
Rr418973	regulatory region 418973	369 bp distal
Rr418974	regulatory region 418974	516 bp distal
Syt2	synaptotagmin II	Intron