rs224883854 SNP Detail

Summary

• ID
  rs224883854
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:9098596 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAAACTTC AAGCACTATA
  TTATAATTTA GATATATGAA TATCTATCTA TATACATTAT AATTAAAACA AGTTATAAAA
  TTTGTTTTCA AATAAATTTA GTGATTTTCA AAATATTTTC TTTAACTGTA TTCATTTTGA
  GCAGTGGCAT ATATCTGATG TGTGGGGAAT AAGGCATGCC AAGTCATAAA TCTATGAATA
  K
  AAAATTAAAA GAAAATTCAA TCCAGCTCTT GGGAAAAGTC TAGTATTAAT ATTAGTTAAG
  GACCTGAAGT AATTGTATGC ATTTGTACAC ACAAACACAC ACATACTACT CACACACATA
  TATAAGCCTT CACTGATAAC CTGGATCAGC TTAATAAAAC TGGATCAAAA TGTACATGGT
  TGAAAATCTA TCCTTTATTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321738855	CHEV_6_9048596	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224883854					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:9098596 () rs orientation: forward

Symbol	Name	Function Class
Nxph1	neurexophilin 1	Intron
Rr626465	regulatory region 626465	889 bp distal