rs224743330 SNP Detail

Summary

• ID
  rs224743330
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16231504 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTCAGCAC TTCAGTTGAC
  TTTATATATA GAATCTAACC AGTGACTAGC AACATCAGAA TGTAGTCTTA TTTTTATAAC
  CCAATTATTT TAAAATACAT TTATTGTGGA GAATTTTCAA TAGATAAATT AGAATTTATT
  ATTAGTAATA AATAGCAGTA GCAGAATAAT ATAATTCATC TTTTAGGGAA CATTTGCCTG
  K
  ATTCAACAAT AATTAATTCA TAGCCAATGT CATTTCCTCT CTAATTCCCC TAATCCCTCT
  CTTCTGGGAA TTTGGCTTTC CTTGGAAGGC AGAGCCAGGG TGGCAAAATA ATAGAAAAGT
  AATGTATAGC CCCGATGGCA GCATGAAACC TGTTTAGTGG GAGGAAATTT GTGGATTAGG
  GTGAGTAGAT ATTACATGGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320670514	CHEV_3_16077340	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224743330					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16231504 () rs orientation: forward

Symbol	Name	Function Class
Rr573789	regulatory region 573789	1990 bp proximal