rs224727367 SNP Detail

Summary

• ID
  rs224727367
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138109161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGGGCTCT GAGCTGGGTG
  GAGAGGGGTC TGCATCAGGG CTCTGAGCTG GGTAGACGGG GGTCTGTGGC AGGGACCTGT
  TCTTTAGCTT CGCTTCACTC TCATCTTGTC TTTTTCTACT TTTTTTTTAA TTAAATGGAC
  ATCTTTTCTT TAAATTACTT AAAAATTGAT CATTTTTCTG GGCCAGTAAG ATGGCTTGGC
  M
  GGCACACGCA TTTGTCTCAA AAAAATCTGG TATCCTGAGC TTCGATCCCT AGAACCTCTG
  TGGAGTTGGA ACGAGGGAAC CAACTCCATA AAGCTAGTAG GCAGCCTCTT GCAGGCAGCC
  TCCTCCCCTG GTTCCAGGGC TTGGGTAGTA AGACTGGCTT GCTCTACTAC TGTCAGAGAT
  TCCCCAGCAC CAGGAATTCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321372968	CHEV_4_137937765	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224727367					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138109161 () rs orientation: forward

Symbol	Name	Function Class
Rr602901	regulatory region 602901	1761 bp distal
Rr602902	regulatory region 602902	1361 bp distal
Rr602903	regulatory region 602903	800 bp proximal
Rr602904	regulatory region 602904	1870 bp proximal