rs224708602 SNP Detail

Summary

• ID
  rs224708602
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52747808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACAGGCTC TGTAGTGTAT
  TCTAGAAGTC CCTGGCAGAG CTCGGCCTCC AACAGAATTC TCCTCTGCCC TGAGACCGCC
  CATCTTCTCC TTCCAGGTTG TCTCAGCAGA ACTCACCGTC TTGGCTGGCC TCTTCAGCCC
  TGGTTCATCT TCTCATCTGT CAGGGACCCA CCTGTGGCTT TAATGTGGGC CTGCCTGAGC
  Y
  CCACCCTCCT ACACCCTGTG GTTATCGGTC CTCCACCCTG ATCTTATCAT CTGCAGGAAA
  TCAAAACACC ATGTGTGTGA GCATAAAATT CTGTCATTTA TTTGTGTTGC AGACTTCAGG
  AAGAGGAGAG AAAGAGAAAA AAAAAAAATC ACAGTTCACT TTTCATTAAA AAAAAGGGGA
  GGGGGGTCAC AACGTTTAAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765407	CHEV_3_52644309	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224708602					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52747808 () rs orientation: forward

Symbol	Name	Function Class
Gm65956	predicted gene, 65956	within coordinates
Gm65967	predicted gene, 65967	within coordinates
Rr576589	regulatory region 576589	6 bp distal
Rr576590	regulatory region 576590	within coordinates