rs224538037 SNP Detail

Summary

• ID
  rs224538037
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152516212 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACACAACCC AAGGTACGTG
  AGCACTTGGA GAGGCCCCAG GACTGAGCTG GCATGCTCCC CCAAAAGGAC AAACCTGTTG
  TGATGGTGTC TCCAAGGGGT TTTTTCTTAG AAGAGATGAC GTGTGGTGGG TTTTGAGAGG
  TGAAGCCTTA GAATAAGTCT TTAGCCTATT GTGGACCAAG ATGTAAGCTC TCAGCGATCC
  T
  GCCTTTGCTC TGCCCTAGCT ATGGACTCTA ATTGTCTGAA GCTCAAATTT AACATTTTCT
  TTTGTAAGTT GCCTTGGTCA TGTTGTTTTA TCACAGCAAC AGAAAAGTAA TCGAGACAGC
  TTGTTTCGGG TATATGGTTA CAGTAACAAA AATCTGAATT GTTTACTGTG ACAGCTTTTT
  TATCCTAGCT GTCAATGGTC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321434657	CHEV_4_151805864	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224538037					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152516212 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
D4Mit356	DNA Segment, Chr 4, Massachusetts Institute of Technology 356			1663 bp distal
Kcnab2	potassium voltage-gated channel, shaker-related subfamily, beta member 2			Intron
				Noncoding-Transcript-Variant
Rr605873	regulatory region 605873			631 bp proximal
Rr605874	regulatory region 605874			713 bp proximal
Rr605875	regulatory region 605875			760 bp proximal