rs224503521 SNP Detail

Summary

• ID
  rs224503521
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101440083 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTATGTGC TGTTGTTGCA
  TGCAGAGGTT CCAGGCTGCC TCAGTACTTC AGGCCTCTGG AACTGACTGC CAGCCAGGCT
  TATTGTGTGT GATGGCTTAG CAGGCCCAAC TCTCTGGGCT GGCTGCAGCA ATGCCCTGTT
  CCCCTTGTTC CCTGTGTGGC CCAGAGTGTT GGTATTGCAG TACCCAGATG CCTCTCAAAC
  R
  ATACAAGTGG GACAGTGTCG CCTCTCAAGC AGTTCAGGTG GGAGGGGTTT CCTCTACTGT
  TTAAGGCTGT TTAGTTCTGG ACCCTGGGAC AAGGGACTAA GGAGCATATT TTACATATCA
  AAGCAGACCT GGCCTCTAGT TCTCCAGGCC TCCCTCAGTC CCTACCTGGC ATACCCTGCC
  CCCAACCTTG AACTTTCCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320852440	CHEV_3_101336690	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224503521					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101440083 () rs orientation: forward

Symbol	Name	Function Class
Gm33162	predicted gene, 33162	within coordinates
Gm65570	predicted gene, 65570	1751 bp upstream
Gm65575	predicted gene, 65575	within coordinates
Rr582075	regulatory region 582075	718 bp proximal