rs224484392 SNP Detail

Summary

• ID
  rs224484392
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:90380812 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAAACTCAG GAGAGTTTCA CCCTGGGACA AGTGAAAGAA
  GCCAGACTTC CCCTCCCCCT CCCCACCCCC AAACTGGGGC TTGGAGTTTA AAGGCACGTG
  Y
  TACAAAAAAA GCATGAGAAC TTGAGTTCAT TCCCAGGACC TACTCTGACT GACCCGGCAC
  TTACAAAGAG AGGCAAGAGA ACTGACTCCT GCAAGCTGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320837838	CHEV_3_90277427	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224484392					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:90380812 () rs orientation: forward

Symbol	Name	Function Class
Rr397810	regulatory region 397810	998 bp downstream
Rr580369	regulatory region 580369	790 bp distal
Rr580370	regulatory region 580370	1187 bp proximal