rs224411845 SNP Detail

Summary

• ID
  rs224411845
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115975400 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACATACACA CAAAGCCTTG
  CATTCAGTCT CCTCTACTGA ATAAACCAGA CTCAATGACA TATGCCTGTC AATCATATTT
  TATATTCAAC CACCTCAGAG ACAAGATGAA GCATTTCAAG ACTCTTACAT GTCTTCCTTG
  TGCTTGTACT AGATAATGTC CTCTAGAAAC AACTATTATT CTCTCACCAC AGGTTTACCC
  R
  TCCTTGAGCT TTATCTGGTG TTAATACTTT CTTGTCTAGT TTATTTCATT GATGTCTGTG
  TCTGCGATGC CCACCCACGT TACTGTATAT CATGGTAGCT TGCTCCTCTG GACTATTAGT
  ATTATTCTAC TATTGGTGAG TAATTGTGCT GGTTTCATCT TTGTTTATTA TGTTGGGGAT
  GAAGAGATGG ACCAGAGGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320894509	CHEV_3_115884669	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224411845					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115975400 () rs orientation: forward

Symbol	Name	Function Class
Rr583660	regulatory region 583660	948 bp distal