rs224343773 SNP Detail

Summary

• ID
  rs224343773
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106642441 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCATTCCCAT TTTACAGATG
  GGGAAGCAGA GGCTCAAGAA GAGTAAACAG CTTACACATA CACACATAGG ATCACCCATC
  TGATAAGGAC AGAACTGAGA CCTAGGTCCA CACTTGTGTA GCTCAGAATC CAAGGCTGCT
  CGACCGTTTT GAAGTACTAC CGCTCGTCTA GCAGACAGGA TAGTCATTTA TGTCTCTGGG
  Y
  ATTTGATCCC ACCACAGGTA GGCCAAGCCA GCACCCACAT CTCTATTCTG GTTTCCTGAG
  ACTCCTCCTC ATGTCCCTTT AAGCCCTCTT GCAGGGAGAG CAATGGTATC AGGACCTGGA
  TCAAAACCGT CTGAAACACG CTGGTCCACC CCCAAGGACG AAAATGCTGG AAAGGCCTTT
  GTCTATCTAG ACAGACTGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321247209	CHEV_4_106457849	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224343773					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106642441 () rs orientation: forward

Symbol	Name	Function Class
Acot11	acyl-CoA thioesterase 11	Intron
Rr596808	regulatory region 596808	99 bp proximal