rs224340756 SNP Detail

Summary

• ID
  rs224340756
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:155271889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCGAAAGAAT GAGCTAATAG
  CCACTTCGGC CTTTCACTGC CTTCTCTGCC TGAGCAAGCC TTCCCCAGAC TGAGCACTGA
  GGAAGGCCTT GGGGAAGTGA TCCACTTCCT ATGAGGTCCC ACCCACTAAA GAACTAGAGC
  TAGCAGGACA GCGATCACAG AAATTATTCT CTCTCTCTCT CCTCTCACAG ACTCTCCCCC
  S
  TCTCCTTCCC CCTCTCTCCC CCTGTCTCCT TCCCTTCCTC TTCCCCCCTT ACACTCTTCC
  CTTCCCCTCT CACCACCCAT CTCTCTGAGC AATCCACTGA CCTGAGGAGT GTGGGCAGGG
  CCTAGAGGCC CCAGCAAGTT CCTGCTGCTA AAATGGGCAG AGCTGAAGTC AGACACTCCA
  GTGCACCCCT GGGGCCAGCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321441140	CHEV_4_154561541	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224340756					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155271889 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr377459	regulatory region 377459			1425 bp upstream
Rr606403	regulatory region 606403			within coordinates
Rr606404	regulatory region 606404			605 bp proximal
Rr606405	regulatory region 606405			1924 bp proximal
Ski	ski sarcoma viral oncogene homolog (avian)			Intron
				Noncoding-Transcript-Variant