rs224310775 SNP Detail

Summary

• ID
  rs224310775
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16876951 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGTATTTT TTTTGAAATG
  TTCTTTTGTT AATTAAAAAA AAGATGAAGG TTTCTTCTTG GATTAAATTA TAGCTTGAAT
  TTCTTTGTGG TTTGATTTTG GTAGCACTTA AAATGAATTA ATTTAAATTT TGATTCAAGA
  AGAATGTATT AATTCCCTTT TCTGTGAAAA CACTGTAAGA GTTTTCCTTT CTTCAAAATG
  W
  TTTTATTTGA ATTCCTGGTC TGAAAGGTAC ACTGCATGGG AAATATGGGG CAATGACTTA
  TCTAGGCTAT CATACGTGTA CAGGTAGAAT TAACCATTTA CCACCTCCTC AAGGTTTGAA
  TAGACAGAGT GACAGGTAGT TTCTCTGGGG TGATTTAATA GCTACGACAA ATCCAAACTC
  TCCCACAGCT GATTCCCACA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320672595	CHEV_3_16722787	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224310775					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16876951 () rs orientation: forward

Symbol	Name	Function Class
Gm26485	predicted gene, 26485	462 bp downstream
Gm30223	predicted gene, 30223	within coordinates
Rr573803	regulatory region 573803	1817 bp distal