rs224185188 SNP Detail

Summary

• ID
  rs224185188
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161627624 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    acacttcct ccaaaaaagg ccacacctcc
  taatcctttc aaatactgcc actccctggt gactcagcat tcaaatctat ggctgatggg
  agctaccctt atccaacccc ccacaGCAGT GTCATGTCAC AGAGTCTACA GACTCTGATG
  T
  TTAACAGTGC CCTCAGGAAC CAAGGATGGT GTTCACTGGA TTATAACACA CCAGGGATCT
  CTCTTCCTGG AAGCAAGGGA TGTCTGTCAT GGGTAGACTC ATACTCATCT CTCAGATTCA
  ACTAAATTTG CTTTTTTGTA CATTTGTTAC                                 
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320081687	CHEV_1_163730186	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224185188					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161627624 () rs orientation: forward

Symbol	Name	Function Class
Rr421849	regulatory region 421849	789 bp distal
Rr421850	regulatory region 421850	within coordinates
Rr421851	regulatory region 421851	1339 bp proximal