rs224182877 SNP Detail

Summary

• ID
  rs224182877
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141448402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGACTCAA GTGTCTGGGG
  TGGATCCTGT TCCTGCCTGA GGGGGGCTAG CCAGTGAACT AGACAAGTGA CCCCCCACTT
  AAAAATCAGC TCTTAAAATA GACACTGAGT TGTCAGGTTA CATAGAGCCA ACAGCACTAA
  CCTGAAAAAC AGGGTGCTGT TTACAGCTAT TTAATACAGG CTTACCACTG TTGGGAATCC
  A
  GGTTTCTGCA TGCCAATTTG GGTTGGGAAG AAAGTCAACA CCGAATTTAC TTAGAGAAGA
  ACTTAGAGCT AGCCTAATTG TTCAAATGGT ACCCTTCAAA CTCCAGACTA AAGACTGAAC
  CCTCCTTAAC CATACAATTA TGATTCAGCC TGCTATCCCC TTTAGTTTAC TTAACATTTT
  CTGCAGACAT CGGAGTGCAA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321389270	CHEV_4_141277006	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224182877					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141448402 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15241	CpG island 15241	1641 bp proximal
Ddi2	DNA-damage inducible protein 2	Intron
Rr398662	regulatory region 398662	1504 bp downstream
Rr603862	regulatory region 603862	976 bp distal
Rr603863	regulatory region 603863	within coordinates
Rr603864	regulatory region 603864	830 bp proximal