rs224168614 SNP Detail

Summary

• ID
  rs224168614
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:114817728 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGCGCACAA CACAGAAGCA GCCCAGACGA
  ATGTGCTGGT CCCACAGAAC TGTTTGTCAC CACACCTTAC TCCTACTCTG TGATGGCTAG
  GGAgaggaac cctgaggaat agagcataag taacttgtcc caagtccatc agctaagggc
  Y
  ggtagagcca gggttcCGTG TGCTGAAACC TCGAGACTAA AGCATCCCAC AGGGCTACTC
  TTGCTAGGAA GAGGTTTTTA TATCCCCCCA CCACCACCTG TCCATCTGCT TTCTTTTGTC
  TGAGACCCTT TTGCTGTAGG GCAAAAGCCA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321914870	CHEV_6_114790785	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224168614					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:114817728 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Atg7	autophagy related 7			Intron
				Noncoding-Transcript-Variant
Gm67840	predicted gene, 67840			465 bp upstream
Rr636840	regulatory region 636840			1506 bp distal
Rr636841	regulatory region 636841			286 bp distal