rs224160226 SNP Detail

Summary

• ID
  rs224160226
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:103045323 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTTGTGAG GCTGAGATCC TTACGTGGAA
  GCTTAAGACA ACTTAGGAAA ATGACGGCTG ATCTCTGAAA GCTGTGATCA ACACTATTTC
  ATCAGAAGGT CCGCTGTGGC TCCCAAGACT GTGGCCAGCC ATGGTAGGAA AATTCTCATA
  Y
  TTTACTTGTA AGACCACACA GCAGACAGTA GCAAAAACAA CAGTGAACTA ACCAATCATT
  TACTCCTCCC TTGAGCTTAA AATGAAACCG ACAGAAGGTA GGTGTGATGG GAAGCACAGA
  TGGCCATGTG ATCACGGGGC ATGGGTACCC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321236083	CHEV_4_102860731	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224160226					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:103045323 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr596372	regulatory region 596372			840 bp proximal
Slc35d1	solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1			Intron
				Noncoding-Transcript-Variant