rs224134782 SNP Detail

Summary

• ID
  rs224134782
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153566303 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTCAGACC CACGGCCTTT
  CTATTTATCA GTTATTATTG TGTGCATATA TATATATATA TATATATATA TATATATATG
  TATGTATATA TATATATATG TATGTATATT TGTGTATACA TATATATATA TATATACATA
  TATATATATA TATATATTTC TAAATATAAT CTGATGTGTC CATATAATGT TACTTGCATG
  W
  GTGTTTTCAG GGCTGATTGG CTTTGGACGA CCAATTTGTG TGCTCTTCTC TGGGGACAGT
  CACCTCTCCC GCTCCCAGCT CTCCTTAGTT GTCTATAGCT CTTTGTGTAG GGTTGAGACC
  TCATGAGCTT TTCTTCATCC AGATTAGCAT ATTCACTGGT GTTGTCCTTG TCACCTCACA
  TCTGGACATT CAGACCCAGT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320564620	CHEV_2_153550119	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224134782					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153566303 () rs orientation: forward

Symbol	Name	Function Class
Dnmt3c	DNA methyltransferase 3C	Intron
Gm74761	predicted gene, 74761	1709 bp downstream
Rr567732	regulatory region 567732	925 bp distal
Rr567733	regulatory region 567733	6 bp proximal