rs224057491 SNP Detail

Summary

• ID
  rs224057491
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:10346126 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCCTGCAT CTGTCGGTTT
  TCTTCCACAC GCTCTTCCTC CTGTGAGATC CACTTCAGTC ATCCAGTCAT TCAGTCAGTG
  CGGATTCCCT ACCCTCCTAA GTCCCACACT CTGGGGGATG CTTGGAATGC AATGGTGAGC
  ATAGGATAGA CCCTTGTTCT CATAATTTGT GAAATACTCC AACAGTGAAA GGGGGCTAAA
  S
  GGGGAGATGG TCCAGAAATT ACTGAGCCAA CTTCTGATGG TCAGCATTGG CCTGACTGGC
  ACACTGCAAG TCCTCTGCAT TATTGCAAAT TTCTAGAAAC TTTATAGGAG TCGAATCCGC
  ATGAGTATAG ATTTCATCTA ATATTTGTAT TAATTTTTCA AGAATTTCAT ATGATCTATT
  TTAATCATAC TCGCCCCCTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320653242	CHEV_3_10281066	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224057491					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:10346126 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fabp12	fatty acid binding protein 12			Intron
				Noncoding-Transcript-Variant
Rr573601	regulatory region 573601			295 bp proximal
Rr573602	regulatory region 573602			1927 bp proximal