rs224028545 SNP Detail

Summary

• ID
  rs224028545
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:131859019 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    agaccctgt ctcaaaaaaa aaaaaAAAAA
  AGTAGGTTTT TTTTTTTCCC CCTGGTCTAT TCAACACAAA ACAATGTCCT CCCTTTTTAT
  GGAGGTGGCT GATGACATCC ATGGCTGAAT CTCTGTCTGA CCTGGAATTC AGTAGCTGAC
  M
  TAGGCCCAGC CTTAGCTCCG GTCTCAGGAT GGCTCTGGCC AGCATGATGT CAGGCATGGT
  CACAGAAGGA GGTAATCACA GCCATACTGG GGACTTTGTG GGTAAGGGAC CAGTAGAAAT
  GTCTCCAAGC AAACCTTTCC TGGCTGGAGC                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321330904	CHEV_4_131687623	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224028545					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131859019 () rs orientation: forward

Symbol	Name	Function Class
Oprd1	opioid receptor, delta 1	Intron
Rr377201	regulatory region 377201	1781 bp downstream
Rr600880	regulatory region 600880	1910 bp distal
Rr600881	regulatory region 600881	619 bp proximal