rs224018002 SNP Detail

Summary

• ID
  rs224018002
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:83578306 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGGTACTAT GAGGGATAGA CAAGTCTCCA
  TCCACAGTTC CCTTAAGGGC CCCCAAAACT TTATTGCCAG TTGTAGTTCG GGCAAGACCT
  GCATCCAGAT AGCAAGTGAA GGCACCAGGC TGACCATCAA TGCTTTCCAC ATTGTATTCA
  Y
  CTCCATTCAC CTCCACTTGG CCTCCATAGA TCTTGTCCAT GCCAAACCTA TTCAGAAGCC
  TGGGGACCAG CAGCAGGCCA GTGCAATAGG TTGCAGCATA ATTTGTCAGG CCAACTTTCA
  GACCATATTT TGGAAGTTCA TGTGCATATG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321844689	CHEV_6_83551318	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224018002					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83578306 () rs orientation: forward

Symbol	Name	Function Class
Gm7424	predicted gene 7424	within coordinates
Rr632899	regulatory region 632899	1736 bp distal
Rr632901	regulatory region 632901	1233 bp distal