rs223973061 SNP Detail

Summary

• ID
  rs223973061
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106645263 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGTTTATG TGAAAACAGC
  CTCATGATTT CATCCATCCA CAAACTCAAC TGTGGCAACT CCTACCGTAA CCAAAGCATA
  GCGCTGTGGT GGCTGAGGCC TTGCAGCCCC AGTACGGTGG GGGAGGGGAG GAGAGGAAGG
  AATGACTCAG TGCGGAGGAG GCAGCCCCAG GCTGGGGTTT TGCTTGAGGC CCAACCCTGT
  R
  AGCAAGAAAC CAGAAGGAAT GTGTGGGACC CTCAGAAAGG ACAGATAACC GGAGGGAGAT
  CAGGGAGGGC ACCGACTATT GGTGGCCTGG TCTGGATCTC TGAGGGCTGG TCAGAAACCA
  GGAGCATTCC AAGTAAGGCG GATAGGTAGA AAGAACAACT CTTCAGATCA CTGAGGTTAA
  TCTCTGTTAA AACTCCATTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321247238	CHEV_4_106460671	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223973061					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106645263 () rs orientation: forward

Symbol	Name	Function Class
Acot11	acyl-CoA thioesterase 11	Intron
Rr596808	regulatory region 596808	1241 bp distal
Rr596809	regulatory region 596809	within coordinates
Rr596810	regulatory region 596810	492 bp distal
Rr596811	regulatory region 596811	1637 bp proximal