rs223909884 SNP Detail

Summary

• ID
  rs223909884
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:79312919 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACATATGCT TATGTTTCAT
  CCTGTGCCTT ATATGATGTA ATTTAGTAAC TTAACAGAGA CATCATCTAC TCTTGCATAG
  TTTTCAAGTT TACAGTGCAA TTTTATTAAT TGTAGCCTCT GTGATGTATG GGATATCTCT
  TTAAATTATT TCTTCTATCT AACTAGGTTT TGTGTCATTT GACCAATAGA CTCACACACA
  S
  AATCTATACA CACATTCAAT ATGTACAATC TAGTTGGCAT TCTATTTTTA GCAGTGGGAA
  CCTTTCTACC TGACTTTTGC AAGAAGATAA TTGTTGCTAA CTTTAGTCAT GATATTGTAG
  GATAGAACTC TAAAGCTGAG TCCTCTTACC TAACTGATAA AACAGTCCAG AAGAAAGTGG
  ATTGTAACTG TGATTCATGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321834627	CHEV_6_79285930	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223909884					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:79312919 () rs orientation: forward

Symbol	Name	Function Class
Rr632524	regulatory region 632524	477 bp distal