rs223848816 SNP Detail

Summary

• ID
  rs223848816
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:111535447 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAGGTGTCA TTGCCGTATG TCTGTGCCAT
  TAAATGATGT TTTATTATGA TTTTCAATAT ATACTGAAAG GTGATACAGT GCTAAACTAG
  CGTCTAACAT GTGATATGCT TGGTACATAT TTTTGTTGGA TGGCTACACA AGAAATAAAC
  K
  TTTATATAAA ATGCAGAATT TGGACTCCTC TTCTAAAAAT GGGGAAATCT GCCTGTTGTG
  ATAACAATCT AAGCCTCCTA AGGCTTACAT TTTACATAGT CCACTTTTGT GTTCTCAAGT
  ACTTGTGGGA TTAATTATCA TGTTAAATCA                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321905985	CHEV_6_111508480	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223848816					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:111535447 () rs orientation: forward

Symbol	Name	Function Class
Grm7	glutamate receptor, metabotropic 7	Intron
Rr379936	regulatory region 379936	910 bp upstream
Rr636272	regulatory region 636272	1170 bp proximal