rs223844557 SNP Detail

Summary

• ID
  rs223844557
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101569501 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGTGGGGG AATCATGTTT
  TTGTACTGAT ATTTAATCTT TGATGAAATA ATTTTCATTG TTAATACAAA ATTACCAACA
  ATGCTACCCG CGTGTGTGCG TGTGGTATGT GTATGGTGTA TGAGCATGCC TGTGTATGCA
  TAGAGGTGAG CGGACGGTTT CAGGTGTCCT TTCTGTCCCT CACTACCTGA ATCCTTTGAG
  R
  CACGCGTCTC CCTGAACCTG TTCCTTTACT GAGGCTGGAA CCCAGGGCCT GCTCATGTTA
  ACACCATCGT TGAGCAAAAC CCCCAACCCC ATGAACCCAA TATTTTCAGC TGGGCACATG
  GCCAGCAAAC TTTAGCAGTT CCCCTGCCTC TAGCCCCATC AGTGCTGGGG TGACAGAAGT
  GTGTTAAACT GTGCCTGGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321231122	CHEV_4_101384909	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223844557					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101569501 () rs orientation: forward

Symbol	Name	Function Class
Rr596204	regulatory region 596204	1627 bp distal