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rs223834652 SNP Detail
Summary
  • ID
    rs223834652
  • Variation Type
    SNP
  • Alleles
    T
Genome Location and Flanking Sequence
  • Location
    Chr4:102344001 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                ATTTGGTGTT ATCAGATTAA
    TTAAGTAATT TATGTGGCTA AATTTACATA TGAATATTAA ATATCAGGCT GGGCTTCTCT
    AATCAGACAG CCAGTGTTTT CAGGGTAACA CTTTGTTCCC AAAACATTCA GAAATATGCA
    AATTGGATTC TTTAATGAGG CTGATATTTA TGTAAGGGAG AAGTCTTCCA GCTAGGAAGA
    T
    GCCTTCCCAT GATATTTTTG TCTGACACCT AAAGCTATGC TAGATGCTTC CCTCTGGAGC
    TGCTCATTAT CAACAACATT ATTTATTTAT TTATTTTCCG CTTTCCATTC TGACTCTGTG
    ACAGTCGGTC TGGCTGTGGC GAGGTCATAA GATCTGCCCT CTGGTCCAAA TTCTGGGTTG
    CTATTTATTA ATAGTAAACC                                            
    
    T = T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss321233804 CHEV_4_102159409 CHEVERUD SCREENING_POP f SNP T T
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs223834652 SNP T T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:102344001 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Pde4b phosphodiesterase 4B, cAMP specific Intron
Noncoding-Transcript-Variant
Rr596251 regulatory region 596251 1733 bp distal
Rr596252 regulatory region 596252 1786 bp distal
Rr596253 regulatory region 596253 1601 bp distal
Rr596254 regulatory region 596254 within coordinates
Rr596255 regulatory region 596255 516 bp distal
Rr596256 regulatory region 596256 1382 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory